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  • Chemical file format
    ... tion. Because these files are sometimes used to describe macromolecular assemblies or molecules represented in [[Molecular mechanics#Environment and solva ... ... with the molecular simulation software package [[GROMACS]]. It closely resembles the PDB format but was designed for storing output from [[molecular dyna ...
    14 KB (2238 words) - 09:36, 17 September 2008
  • FASTA format
    EMBL Data Library gi|''gi-number''|emb|''accession''|''locus'' #\Name=ENSEMBL
    13 KB (1766 words) - 11:08, 19 August 2008
  • HSLpred
    ... protein sequence in one of the standard formats, such as FASTA, GenBankTM, EMBL, GCG, or plain format. The server provides options to select various appro ...
    4 KB (618 words) - 08:45, 20 August 2008
  • AntiBP
    ... the input sequence i.e. whether the sequence is in plain text or FASTA/PIR/EMBL/GENBANK etc. format. The server uses ReadSeq to inter-convert the format o ...
    2 KB (293 words) - 04:11, 22 August 2008
  • List of sequenced eukaryotic genomes
    ... vailable complete nuclear and organelle genome sequences that have been assembled, annotated and published; draft genomes are not included, nor are organe ... | The Genome Sequencing Platform, The Genome Assembly Team
    14 KB (1662 words) - 04:52, 17 September 2008
  • Molecular graphics
    | EMBL - [http://swift.cmbi.ru.nl/whatif/ WHAT IF]
    26 KB (3817 words) - 04:05, 27 August 2008
  • Datasets in Bioinformatics
    ... were developed. First, a typical benchmark set made of sequences from the EMBL database release 50 (1997) that included 178 human genomic sequences (h178 ...
    16 KB (2424 words) - 11:41, 5 September 2008
  • Installing Bioperl on Windows
    ... vides interfaces to various types of databases both remote ([[GenBank]], [[EMBL]] etc) and local ([http://www.mysql.com MySQL], [[HOWTO|Flat_databases fla ...
    27 KB (4360 words) - 10:36, 8 September 2008
  • GenBank
    ... e DNA DataBank of Japan (DDBJ), the European Molecular Biology Laboratory (EMBL), and GenBank at NCBI. These three organizations exchange data on a daily ...
    3 KB (426 words) - 04:26, 9 September 2008
  • Rfam
    ... keyword, family name, or genome as well as to search by ncRNA sequence or EMBL accession number. [http://www.sanger.ac.uk/Software/Rfam/index.shtml ]
    4 KB (629 words) - 03:40, 11 September 2008
  • Biological Sequence Databases
    * [http://www.ebi.ac.uk/embl/ EMBL(Europe)] * [http://www.ebi.ac.uk/trembl/ TrEMBL(trqnslated EMBL)]
    10 KB (1398 words) - 01:30, 30 October 2011
  • BioModels Database
    ... he [http://www.ebi.ac.uk/compneur Computational Neurobiology Group] at the EMBL-EBI, UK and the SBML Team in Caltech, USA, plus [http://doqcs.ncbs.res.in ...
    4 KB (626 words) - 03:55, 15 September 2008
  • Immunotation of Rv3921c
    ... c), len: 366. Unknown membrane protein, equivalent to M. leprae TR:Q50205 (EMBL:L39923) L222-ORF13 (312 aa), fasta scores; opt: 1770 z-score: 2084.5 E(): ...
    4 KB (511 words) - 06:54, 2 February 2010
  • Immunotation of Rv3918c
    Rv3918c, (MTV028.09c), len: 347. Unknown, similar to TR:O05189(EMBL:U87804) CHROMOSOME PARTITIONING PROTEIN PARA from CAULOBACTER CRESCENTUS ( ...
    4 KB (538 words) - 07:59, 2 February 2010
  • Rv2110c
    ... aa. prcB, proteasome beta-type subunit 2, highly similar to eg. TR:Q53083 (EMBL:U264 22) proteasome beta-type subunit 2 from Rhodococcus (292 aa), FASTA s ...
    4 KB (588 words) - 19:35, 12 March 2010

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