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Systems Biology Markup Language (SBML)
... e, based on XML, for representing models of biochemical reaction networks. SBML can represent metabolic networks, cell-signaling pathways, regulatory netw ... [http://www.sbml.org/specifications/sbml-level-1/version-1/ SBML Level 1, Version 1]

12 KB (1873 words) - 03:37, 15 September 2008

Computational systems biology
... iology are the Systems Biology Markup Language ([http://sbml.org/index.psp SBML]) and CellML. Many important software projects in computational systems bi ...

6 KB (835 words) - 03:31, 15 September 2008
Systems Biology Markup Language (SBML)
... e, based on XML, for representing models of biochemical reaction networks. SBML can represent metabolic networks, cell-signaling pathways, regulatory netw ... [http://www.sbml.org/specifications/sbml-level-1/version-1/ SBML Level 1, Version 1]

12 KB (1873 words) - 03:37, 15 September 2008
BioModels Database
... it the models in SBML and CellML. Models can subsequently be downloaded in SBML, CellML, [http://www.math.pitt.edu/~bard/xpp/xpp.html XPP], SciLab, [http ... ... e, there is also the link for downloading tar ball of all models' files in SBML format.

4 KB (626 words) - 03:55, 15 September 2008
BioPAX
... g BioPAX and converting BioPAX to [[Systems Biology Markup Language (SBML)|SBML]], as part of the [http://vcell.org Virtual Cell].

1 KB (172 words) - 04:54, 16 September 2008
CellML
... o Systems Biology Markup Language [[Systems Biology Markup Language (SBML)|SBML]] but provides greater scope for model modularity and reuse, and is not sp ... *[[Systems Biology Markup Language (SBML)|SBML]]

5 KB (726 words) - 04:57, 16 September 2008