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- BLAST ... e process is repeated. <br /> By including related proteins in the search, PSI-BLAST is much more sensitive in picking up distant [[Phylogenetic tree|evolution ...20 KB (3062 words) - 11:25, 19 August 2008
- Blast Algorithm
7 KB (983 words) - 04:59, 19 September 2008
Page text matches
- Homology Modeling
9 KB (1291 words) - 11:19, 19 August 2008
- Installing Bioperl for Unix
17 KB (2842 words) - 10:16, 8 September 2008
- Protein subcellular localization prediction ... nes power of composition based SVM models and similarity search techniques PSI-BLAST. <ref> J. Biol. Chem. 2005, 280:14427–14432.10 KB (1368 words) - 06:30, 20 August 2008
- CASP
3 KB (443 words) - 06:04, 27 August 2008
- Genomics
5 KB (708 words) - 07:03, 18 August 2008
- List of protein structure prediction software | PSI-BLAST ... rd [[neural networks]] which perform an analysis on output obtained from [[PSI-BLAST]]|| Webserver || [http://bioinf.cs.ucl.ac.uk/psipred/ server]7 KB (907 words) - 11:34, 18 August 2008
- Bioinformatics Center, IMTECH ... . and Raghava, G. P. S. (2004) Prediction of Alpha-turns in proteins using PSI-BLAST profiles and secondary structure information. Proteins: Structure, Functio ... ... llular Localization of Eukaryotic Proteins using Dipeptide Composition and PSI-BLAST. Nucleic Acids Reasearch 32:W414-9.34 KB (4785 words) - 10:18, 19 August 2008
- BLAST ... e process is repeated. <br /> By including related proteins in the search, PSI-BLAST is much more sensitive in picking up distant [[Phylogenetic tree|evolution ...20 KB (3062 words) - 11:25, 19 August 2008
- PSEApred ... espectively. In this study, for the first time PSSM profiles obtained from PSI-BLAST, have been used for predicting secretory proteins. We achieved maximum MCC ...2 KB (275 words) - 10:46, 19 August 2008
- FASTA
9 KB (1295 words) - 11:59, 19 August 2008
- TBpred
7 KB (1080 words) - 16:48, 31 August 2008
- HSLpred ... use it has the capability to detect remote homologies. Three iterations of PSI-BLAST were carried out at a cut-off E-value of 0.001. This module could predict ... ... of 20 for amino acid composition, 400 for dipeptide composition, five for PSI-BLAST output. The performance of this module was better then any other individua ...4 KB (618 words) - 08:45, 20 August 2008
- Cytokine prediction, cytopred ... hem into families and subfamilies with high sensitivity and specificity. A PSI-BLAST + SVM based hybrid approach is adopted to develop the prediction methods. ... ... d to provide just a single sequence if the prediction approach selected is PSI-BLAST based. In order to predict for multiple sequences, SVM based approach must ...2 KB (242 words) - 04:15, 22 August 2008
- PRRDB, pattern-recognition receptor
3 KB (407 words) - 04:15, 22 August 2008
- PSLpred iv) ''<b>Similarity-search based module</b>'' The performance of the PSI-BLAST based module was also evaluated through 5-fold cross-validation. The perfo ...6 KB (896 words) - 07:07, 27 August 2008
- BioPerl
1 KB (158 words) - 03:36, 1 September 2008
- Datasets in Bioinformatics ... . The prediction is done by SVM model trained on PSSM profile generated by PSI-BLAST search of 'nr' protein database. The SVM model is trained and tested on a ... ... oxins and its function from primary amino acid sequence using SVM, HMM and PSI-Blast. Bacterial toxins play an vital role to cause disease and are responsible ...16 KB (2424 words) - 11:41, 5 September 2008
- Gene Prediction Methods
4 KB (643 words) - 08:39, 5 September 2008
- Tuberculosis Status
3 KB (441 words) - 00:27, 6 September 2008
- MRNA Interferases from Mycobacterium tuberculosis
5 KB (770 words) - 14:10, 9 September 2008
