From DrugPedia: A Wikipedia for Drug discovery

Rv0334
Name
rmlA
Identifiers
Swiss Prot	P72017
Genbank	886568
PDB	2QKX
Chemical data
Formula	C19H21NO4 [1]
Mol. wt.	31493 Da
Pharmacokinetic data
Bioavailability	?
Solubility	?
Isoelectric-Point	5.97

Contents 1 General 1.1 Protein Sequence 2 Human Homologue Blast Result 3 Alergen Protein 4 Bacterial Toxin Prediction 5 Subcellular Location 6 Antigens 6.1 B cell Epitopes 6.1.1 BCEpred Analysis 6.1.2 ABCpred Analysis 6.1.3 IEDB Analysis 7 MHC Class-I Binder 7.1 nHLAPred Analysis 7.2 IEDB Analysis 8 MHC Class-II Binder 8.1 Propred Analysis 8.2 NetMHC-II Analysis 9 External Links

[edit] General

PEPTIDOGLYCAN AND LIPOPOLYSACCHARIDE BIOSYNTHESIS . PRODUCT: Probable UDP-N-acetylglucosamine pyrophosphorylase glmU

Other PDBID: 3D8V,3D98,3DJ4,3FOQ

[edit] Protein Sequence

>Rv0334, TB.seq 398656:399519 MW:31493 MRGIILAGGSGTRLYPITMGISKQLLPVYDKPMIYYPLTTLMMAGIRDIQLITTPHDAPGFHRLLGDGAHLGVNISYATQ DQPDGLAQAFVIGANHIGADSVALVLGDNIFYGPGLGTSLKRFQSISGGAIFAYWVANPSAYGVVEFGAEGMALSLEEKP VTPKSNYAVPGLYFYDNDVIEIARGLKKSARGEYEITEVNQVYLNQGRLAVEVLARGTAWLDTGTFDSLLDAADFVRTLE RRQGLKVSIPEEVAWRMGWIDDEQLVQRARALVKSGYGNYLLELLERN

[edit] Human Homologue Blast Result

subject ids	% identity	% positives	alignment length	evalue
sp|O60645.2	26	44	250	3e-11
sp|O95613.3	39	66	53	4e-06
sp|Q9ULV5.1	22	41	236	0.007
sp|Q6ZW49.1	39	56	51	0.91
sp|Q15080.2	39	42	61	1.5

[edit] Alergen Protein

Link to Algpred
Non Allergen Predicted by AlgPred Server

[edit] Bacterial Toxin Prediction

Link to btxpred
No Hit Fountd by btxpred server.

[edit] Subcellular Location

Link to TBpred
Integral Membrane

[edit] Antigens

No Hit Found in AntigenDB
No. Hit Found in IEDB

[edit] B cell Epitopes

[edit] BCEpred Analysis

Link to Bcepred
Result Predicited by [2]

[edit] ABCpred Analysis

Link to ABCpred
Result Predicited by [3]

[edit] IEDB Analysis

Link to IEDB
Result Predicited by [4]

[edit] MHC Class-I Binder

[edit] nHLAPred Analysis

Link to nHLApred
Result Predicited by [5]

[edit] IEDB Analysis

Link to IEDB
Result Predicted by [6]

[edit] MHC Class-II Binder

[edit] Propred Analysis

Link to Propred
Result Predicted by [7]

[edit] NetMHC-II Analysis

Link to NetMHC-II
Result Predicted by [8]

[edit] External Links

• Database of Mycobacterium tuberculosis genome sequences and related information.