PolysacDB O-polysaccharide 2065

From DrugPedia: A Wikipedia for Drug discovery

Contents 1 Carbohydrate Name 2 Carbohydrate Class 3 Source Microbe 4 Basic Structure 5 Proposed functions 6 Antigenic Nature used to produce antibodies 7 Carrier Name 8 Conjugation Method 9 Antibodies 10 Antibody type and class 11 Assay System 12 Cross-reactivity 13 Proposed epitopes 14 Proposed Utility 15 Weblink 16 External Links

[edit] Carbohydrate Name

O-polysaccharide

[edit] Carbohydrate Class

O-polysaccharide [LPS]

[edit] Source Microbe

Pseudomonas syringae serogroup O1 strain atrofaciens NCPPB 2612

[edit] Basic Structure

O-polysaccharides of the LPS consists of tetra- and tri-α-D-rhamnose repeats in the backbone [-3)D-Rha(α1->3)D-Rha(α1-->2)D-Rha(α1->2)D-Rha(α1] and [3)D-Rha(α1-->3)D-Rha(α1-->2)D-Rha(α1-]

[edit] Proposed functions

N/A

[edit] Antigenic Nature used to produce antibodies

Whole cells

[edit] Carrier Name

nil

[edit] Conjugation Method

nil

[edit] Antibodies

Mab Ps1C1

[edit] Antibody type and class

IgG3

[edit] Assay System

ELISA, agglutination and immunoblotting

[edit] Cross-reactivity

This Mab showed strong reactivity with OPS of chemotype 1C and weak reactivity with OPS of chemotype 1C-1A with a low content of 1A linear O repeats

[edit] Proposed epitopes

The epitope is related to the lateral D-GlcNAc residue and also one or more D-Rha residues of the backbone 1A and is more influenced by the protein-dependent conformation of the OPS chain

[edit] Proposed Utility

This Mab agglutinated heat-killed homologous bacterial cells

[edit] Weblink

PubMed Central

[edit] External Links

• Link to PolysacDB database