Hormone-Receptor Database
From DrugPedia: A Wikipedia for Drug discovery
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| - | [http://pharminfo.pharm.kyoto-u.ac.jp/services/glida/index.php]'''GLIDA''' is a database | + | [http://pharminfo.pharm.kyoto-u.ac.jp/services/glida/index.php]'''GLIDA''' is a database thar have the information on both GPCRs and their known ligands. |
| + | |||
| + | # A complex information system covering biological information of GPCRs as well as chemical information of their known ligands. | ||
| + | # Two starting points : Enterable either by GPCR search or ligand search. | ||
| + | # Cross-searchable between GPCRs and their ligands. | ||
| + | |||
| + | This database use the GPCRDb classification system for classifying GPCR and Clustering Method for classifying Ligands.It has similarity search sytem for both ligand and GPCR. | ||
[http://www.gpcr.org/7tm/ligand/Seeman/S1A.html]'''IUPHAR''' A Database of GPCR Protein | [http://www.gpcr.org/7tm/ligand/Seeman/S1A.html]'''IUPHAR''' A Database of GPCR Protein | ||
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[http://www.lipidmaps.org/] The '''LIPID MAPS'''(LIPID Metabolites And Pathways Strategy) structure database now contains a total of 10,789 entries, including 2688 Fatty acyls (FA), 3009 Glycerolipids (GL), 1971 Glycerphospholipids (GP), 621 Sphingolipids (SP), 1745 Sterol lipids (ST), 609 Prenol lipids (PR), 10 Saccharolipids (SL), and 136 Polyketides (PK). | [http://www.lipidmaps.org/] The '''LIPID MAPS'''(LIPID Metabolites And Pathways Strategy) structure database now contains a total of 10,789 entries, including 2688 Fatty acyls (FA), 3009 Glycerolipids (GL), 1971 Glycerphospholipids (GP), 621 Sphingolipids (SP), 1745 Sterol lipids (ST), 609 Prenol lipids (PR), 10 Saccharolipids (SL), and 136 Polyketides (PK). | ||
| - | [http://pepbank.mgh.harvard.edu/]'''PepBank''' is a database of peptides based on sequence text mining and public peptide data sources. Only peptides that are 20 amino acids or shorter are stored. | + | [http://pepbank.mgh.harvard.edu/]'''PepBank''' is a database of peptides based on sequence text mining and public peptide data sources. Only peptides that are 20 amino acids or shorter are stored. This will show a heat map for a paticular peptide that show their relative tendency in cancer, cardiovascular disease, diabetes related, Apoptosis related, Angiogenesis related,Molecular imaging related,binding data avialable. |
Revision as of 06:48, 19 September 2008
[1]GLIDA is a database thar have the information on both GPCRs and their known ligands.
- A complex information system covering biological information of GPCRs as well as chemical information of their known ligands.
- Two starting points : Enterable either by GPCR search or ligand search.
- Cross-searchable between GPCRs and their ligands.
This database use the GPCRDb classification system for classifying GPCR and Clustering Method for classifying Ligands.It has similarity search sytem for both ligand and GPCR.
[2]IUPHAR A Database of GPCR Protein
[3]EndoNet is a database that provides information about endocrine networks. Using information about hormones' donor and acceptor cells a network is built that represents hormonal signaling pathways as a bipartite graph comprising hormones and tissues as node classes. The involved components, the intercellular information flow and the inhibition or activation effects are displayed.
[4]LipidBank is an open, publicly free database of natural lipids including fatty acids, glycerolipids, sphingolipids, steroids, and various vitamins.The database contains more than 6000 unique molecular structures (ChemDraw cdx format, MDL MOL format), their lipid names (common name, IUPAC), spectral information (mass, UV, IR, NMR and others), and most importantly, literature information.
[5] The LIPID MAPS(LIPID Metabolites And Pathways Strategy) structure database now contains a total of 10,789 entries, including 2688 Fatty acyls (FA), 3009 Glycerolipids (GL), 1971 Glycerphospholipids (GP), 621 Sphingolipids (SP), 1745 Sterol lipids (ST), 609 Prenol lipids (PR), 10 Saccharolipids (SL), and 136 Polyketides (PK).
[6]PepBank is a database of peptides based on sequence text mining and public peptide data sources. Only peptides that are 20 amino acids or shorter are stored. This will show a heat map for a paticular peptide that show their relative tendency in cancer, cardiovascular disease, diabetes related, Apoptosis related, Angiogenesis related,Molecular imaging related,binding data avialable.
