Check

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Current revision (11:44, 4 December 2008) (edit) (undo)
 
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<table align='right'>
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<tr><td>
<jmol>
<jmol>
   <jmolApplet>
   <jmolApplet>
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<size>400</size>
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<color>white</color>
     <uploadedFileContents>1vrt.pdb</uploadedFileContents>
     <uploadedFileContents>1vrt.pdb</uploadedFileContents>
   </jmolApplet>
   </jmolApplet>
</jmol>
</jmol>
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 +
<jmol>
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<jmolButton>
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<item><text>Toggle spin</text><script>if(_spinning);spin off;else;spin on;endif;</script></item>
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</jmolButton>
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<jmolButton>
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    <script>color atoms amino</script>
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    <text>color atoms amino</text>
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</jmolButton>
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<jmolAppletButton>
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    <uploadedFileContents>1vrt.pdb</uploadedFileContents>
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    <text>Show popup window</text>
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</jmolAppletButton>
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</jmol>
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<br />
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<jmol>
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<jmolButton>
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    <script>color atoms cpk</script>
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    <text>color atoms cpk</text>
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</jmolButton>
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<jmolButton>
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    <script>backbone 0.5;color backbone  greenyellow</script>
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    <text>backbone on</text>
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</jmolButton>
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<jmolButton>
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    <script>backbone off</script>
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    <text>backbone off</text>
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</jmolButton>
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<jmolButton>
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    <script>set allowEmbeddedScripts FALSE;stereo 5;zoom 75%;</script>
 +
   
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    <text>Stereo on</text>
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</jmolButton>
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<jmolButton>
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    <script>set allowEmbeddedScripts FALSE;stereo off;zoom 125%;</script>
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    <text>Stereo off</text>
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</jmolButton>
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</jmol>
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<jmol>
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<jmolButton>
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    <script>select protein;ribbons on</script>
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    <text>Ribbons on</text>
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</jmolButton>
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<jmolButton>
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    <script>Ribbons off</script>
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    <text>Ribbons off</text>
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</jmolButton>
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<jmolButton>
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    <script>ramachandran</script>
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    <text>Ramachandran Plot</text>
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</jmolButton>
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<jmolButton>
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    <script>unitcell on</script>
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    <text>unitcell ON</text>
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</jmolButton>
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</jmol>
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<jmol>
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<jmolButton>
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    <script>unitcell off</script>
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    <text>unitcell Off</text>
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</jmolButton>
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<jmolButton>
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    <script>dots VANDERWAALS</script>
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    <text>VANDERWAALS</text>
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</jmolButton>
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<jmolButton>
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    <script>console</script>
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    <text>Show Console</text>
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</jmolButton>
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<jmolButton>
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    <script>set frank on</script>
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    <text>Show Jmol Logo</text>
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</jmolButton>
 +
<jmolButton>
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    <script>set frank off</script>
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    <text>Hide Jmol Logo</text>
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</jmolButton>
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</jmol>
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<jmol>
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<jmolButton>
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<script>moveto /* time, axisAngle */ 1.0 { 959 -283 1 82.2} /* zoom, translation */  2830.27 0.0 0.0  /* center, rotationRadius */ {25.542004 -16.559 29.8555} 65.09315 /* navigation center, translation, depth */ {0.0 0.0 0.0} -579.4379 -1132.8729 50.0;
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#OR
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#Follows Z-Y-Z convention for Euler angles
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reset;center {25.542004 -16.559 29.8555}; rotate z 106.49; rotate y 82.2; rotate z -106.42; zoom 2830.27;
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</script>
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    <text>Show Active Site</text>
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</jmolButton>
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<jmolButton>
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<script>select all;reset;zoom 130.76;</script>
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    <text>Show original</text>
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</jmolButton>
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</jmol>
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<br />
 +
'''Binding site of 1vrt.pdb'''
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</td></tr>
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</table>

Current revision




Binding site of 1vrt.pdb

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