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Revision as of 10:30, 3 February 2010 (edit) Priyanka priyadarshini (Talk | contribs) (New page: {{immunebox | Name =<Rv1882c> PROBABLE SHORT-CHAIN TYPE DEHYDROGENASE/REDUCTASE |image= | width=250 |image2= |Swiss Prot = O07749 | Genbank = | PDB = No structure...) ← Previous diff		Revision as of 10:30, 3 February 2010 (edit) (undo) Priyanka priyadarshini (Talk | contribs) (→Human Homologue Blast Result) Next diff →
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	<tr><td> sp|Q6IAN0</td><td> </td><td> </td><td> </td><td> 3e-16</td></tr>		<tr><td> sp|Q6IAN0</td><td> </td><td> </td><td> </td><td> 3e-16</td></tr>
-	<tr><td>sp|Q8N3Y7</td><td> </td><td> </td><td> </td><td> 5e-16 Gene info</td></tr>	+	<tr><td>sp|Q8N3Y7</td><td> </td><td> </td><td> </td><td> 5e-16 </td></tr>
	<tr><td>sp|Q7Z4W1</td><td> </td><td> </td><td> </td><td> 3e-13 </td></tr>		<tr><td>sp|Q7Z4W1</td><td> </td><td> </td><td> </td><td> 3e-13 </td></tr>

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Revision as of 10:30, 3 February 2010

Immunotation of Rv1882c
Name
<Rv1882c> PROBABLE SHORT-CHAIN TYPE DEHYDROGENASE/REDUCTASE
Identifiers
Swiss Prot	O07749
Genbank	?
PDB	structure available No structure available
Chemical data
Formula	?
Mol. wt.	30010.3
Pharmacokinetic data
Bioavailability	?
Solubility	?
Isoelectric-Point	10.079

Contents 1 General 1.1 Protein Sequence 2 Human Homologue Blast Result 3 Alergen Protein 4 Bacterial Toxin Prediction 5 Subcellular Location 6 Antigens 6.1 B cell Epitopes 6.1.1 BCEpred Analysis 6.1.2 ABCpred Analysis 6.1.3 IEDB Analysis 7 MHC Class-I Binder 7.1 nHLAPred Analysis 7.2 IEDB Analysis 7.3 Propred Analysis 7.4 NetMHC-II Analysis 8 External Links

General

Protein Sequence

>Rv1882c, TB.seq 2132371:2133201 MW:30011 MKAIFITGAGSGMGREGATLFHANGWRVGAIDRNEDGLAALRVQLGAERLWARAVDVTDKAALEGALADFCAGNVGGGLD MMWNNAGIGEGGWFEDVPYEAAVRVVDVNFKAVLTGAYAALPYLKKAPGSLMFSTSSSSGTYGMPRIAVYSATKHAVKGL TEALSVEWQRHGVRVADVLPGLIDTAILTSTRQHSDEGPYTISAEQIRAAAPKKGMFRLMPSSSVAEAAWRAYQHPTRLH WYVPRSIRWIDRLKGVSPEFVRRHIAKSLATLEPKRK

Human Homologue Blast Result

subject ids	% identity	% positives	alignment length	evalue
sp|P15428				8e-17
sp|Q6IAN0				3e-16
sp|Q8N3Y7				5e-16
sp|Q7Z4W1				3e-13
sp|Q06136				7e-13

Alergen Protein

Link to Algpred
Non Allergen Predicted by AlgPred Server

Bacterial Toxin Prediction

Link to btxpred
No Hit Fountd by btxpred server.

Subcellular Location

Link to TBpred
CYTOPLASMIC PROTEIN

Antigens

No Hit Found in AntigenDB
No. Hit Found in IEDB

B cell Epitopes

BCEpred Analysis

Link to Bcepred
Result Predicited by Bcepred

ABCpred Analysis

Link to ABCpred
Result Predicited by ABCPred

IEDB Analysis

Link to IEDB
Result Predicited by IEDB

MHC Class-I Binder

nHLAPred Analysis

Link to nHLApred
Result Predicited by [1]

IEDB Analysis

Link to IEDB
Result Predicted by [2]

=MHC Class-II Binder=49

Propred Analysis

Link to Propred
Result Predicted by [3]

NetMHC-II Analysis

Link to NetMHC-II
Result Predicted by [4]

External Links

• Database of Mycobacterium tuberculosis genome sequences and related information.