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  • Virtual screening
    ... to related protein structures), and a docking code comprising an efficient searching algorithm and an accurate scoring function. ... crimination is not possible using a pharmacophore model, because available searching software cannot handle queries with the number of points needed to adequat ...
    5 KB (724 words) - 06:29, 11 August 2008
  • Docking
    other modes explored through the searching algorithm. A rigorous searching algorithm would go through all possible binding modes between the two mole ...
    4 KB (593 words) - 04:42, 17 September 2008
  • 3D Pharmacophore
    ... es prompted the development of 3D database software capable of storing and searching a large number of molecules. The 2D databases have continued largely as ar ...
    2 KB (295 words) - 07:10, 8 September 2008
  • Manual:FAQ
    ... default, MediaWiki uses MyISAM's fulltext matching functionality to allow searching page content. The default settings for this mean that words of less than f ...
    50 KB (7837 words) - 17:55, 8 September 2008
  • Entrez
    Entrez also provides a similar interface for searching each particular database and for refining search results. The Limits feat ...
    5 KB (692 words) - 04:33, 17 August 2008
  • Chemical file format
    ... a smiles string for each compound. eMolecules supports fast substructure searching based on parts of the molecular structure.
    14 KB (2238 words) - 09:36, 17 September 2008
  • Docking (molecular)
    {{main|Searching the Conformational Space for Docking}}
    12 KB (1708 words) - 05:48, 17 September 2008
  • Genomics
    ... For instructions on how to use BLAST, see the tutorial Sequence similarity searching using NCBI BLAST available through Gene Gateway, an online guide for learn ...
    5 KB (708 words) - 07:03, 18 August 2008
  • DNA
    ... | publisher= MIT Press | date=2001| isbn=978-0-262-02506-5}}</ref> String searching or matching algorithms, which find an occurrence of a sequence of letters ...
    82 KB (11827 words) - 06:08, 20 August 2008
  • Bioinformatics Center, IMTECH
    BIC has initiated a mission in 1999 to develop tools and databases for searching antigenic regions which can serve as vaccine candidates. A few web servers ...
    34 KB (4785 words) - 10:18, 19 August 2008
  • BLAST
    ... sequences in a database search. BLAST is more time efficient than FASTA by searching only for the more significant patterns in the sequences, but with comparat ... ... terman algorithm]]. The exhaustive Smith-Waterman approach is too slow for searching large genomic databases such as [[GenBank]]. Therefore, the BLAST algorith ...
    20 KB (3062 words) - 11:25, 19 August 2008
  • FASTA
    ... ]. The original FASTP program was designed for protein sequence similarity searching. FASTA, described in 1988 ([http://www.ncbi.nlm.nih.gov/entrez/query.fcgi ...
    9 KB (1295 words) - 11:59, 19 August 2008
  • PRRDB, pattern-recognition receptor
    ... s have been integrated in PRRDB in order to provide following services: i) searching on any field; ii) database browsing; and iii) BLAST search against the pat ...
    3 KB (407 words) - 04:15, 22 August 2008
  • Computational chemistry
    * Storing and searching for data on chemical entities (see [[chemical database]]s).
    29 KB (4051 words) - 07:26, 25 August 2008
  • Bioinformatics and Drug discovery
    ... en a new area of research. However, computational techniques assist one in searching drug target and in designing drug ''in silco'', but it takes long time and ...
    9 KB (1370 words) - 07:16, 26 August 2008
  • Zincfinger
    (BI tools related to searching zinc fingers)
    1 KB (188 words) - 13:25, 31 August 2008
  • Open Source Database
    * Full-text indexing and searching using MyISAM engine
    22 KB (3148 words) - 07:16, 1 September 2008
  • Bioinformatics Databases
    ... allows users to retrieve and analyze the data that includes: (i) tools for searching database using keywords with many options and, (ii) browsing tool that all ... ... information in literature. It also allows sketching structures online and searching of similar structures in database
    5 KB (765 words) - 12:07, 1 September 2008
  • Datasets in Bioinformatics
    The server allows searching of antigen sequence against MHCBN Database version 3.1 (13). MHCBN is a co ...
    16 KB (2424 words) - 11:41, 5 September 2008
  • Guides for Scientific writing
    ... ining annotated bibliographies (e.g. by CABI).http://www.cabi.org ,On-line-searching of database titles; Current contents.
    27 KB (4389 words) - 11:03, 5 September 2008

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