nHLAPred A neural network based MHC Class-I Binding Peptide Prediction Server Home ComPred ANNPred References Help Matrices Team Contact Antigen Name Untitled Scanned on Tue Feb 2 23:04:32 2010 Length of input sequence 857 amino acids Number of nonamers from input sequence 849 Threshold setting .5 Number of alleles in query 67 Number of top scorers to be displayed 4 Number of top scorers to be displayed 4 Proteosome Filter on at 5 threshold ImmunoProteosome Filter off ALLELE: HLA-A1 Threshold for .5 % with score: .5 Prediction method Rank Sequence Residue No. Peptide Score ANNs+QM 1 AAMVAAATL 386 0.940 ANNs+QM 2 AAEGAIDAA 306 0.530 ANNs+QM 3 FLPDKAIDL 403 0.280 ANNs+QM 4 DLDVVAEVD 481 0.230 ALLELE: HLA-A2 Threshold for .5 % with score: .5 Prediction method Rank Sequence Residue No. Peptide Score ANNs+QM 1 FLPDKAIDL 403 1.000 ANNs+QM 2 IYNSLLQVL 643 1.000 ANNs+QM 3 GLIREGEGV 120 0.990 ANNs+QM 4 GLIHEGEGV 45 0.980 ALLELE: HLA-A*0201 Threshold for .5 % with score: .5 Prediction method Rank Sequence Residue No. Peptide Score ANNs+QM 1 FLPDKAIDL 403 0.990 ANNs+QM 2 GLIHEGEGV 45 0.970 ANNs+QM 3 GLIREGEGV 120 0.930 ANNs+QM 4 IYNSLLQVL 643 0.270 ALLELE: HLA-A*0202 Threshold for .5 % with score: .5 Prediction method Rank Sequence Residue No. Peptide Score ANNs+QM 1 DLAKAGAHS 840 8.590 ANNs+QM 2 FLPDKAIDL 403 0.990 ANNs+QM 3 VLTDAAKAL 759 0.980 ANNs+QM 4 GLIREGEGV 120 0.970 ALLELE: HLA-A*0203 Threshold for .5 % with score: .5 Prediction method Rank Sequence Residue No. Peptide Score ANNs+QM 1 HTIEILKGL 363 0.980 ANNs+QM 2 DMALVLTDA 755 0.940 ANNs+QM 3 IYNSLLQVL 643 0.840 ANNs+QM 4 DLAKAGAHS 840 0.720 ALLELE: HLA-A*0206 Threshold for .5 % with score: .5 Prediction method Rank Sequence Residue No. Peptide Score ANNs+QM 1 GLIREGEGV 120 0.990 ANNs+QM 2 GLIHEGEGV 45 0.970 ANNs+QM 3 FLPDKAIDL 403 0.970 ANNs+QM 4 VSITDAAMV 381 0.950 ALLELE: HLA-A*0205 Threshold for 4 % with score: 5.950 Prediction method Rank Sequence Residue No. Peptide Score QM 1 AASILKPKL 313 13.250 QM 2 AAMVAAATL 386 8.990 QM 3 AAEGAIDAA 306 7.290 QM 4 DRARRVVVL 16 6.360 ALLELE: HLA-A*1101 Threshold for 4 % with score: 4 Prediction method Rank Sequence Residue No. Peptide Score ANNs+QM 1 LTAAAMEGK 187 0.990 ANNs+QM 2 GVGKTELSK 565 0.990 ANNs+QM 3 LIGEPGVGK 223 0.970 ANNs+QM 4 ALVLTDAAK 757 0.930 ALLELE: HLA-A11 Threshold for 4 % with score: 4 Prediction method Rank Sequence Residue No. Peptide Score ANNs+QM 1 LTAAAMEGK 187 1.000 ANNs+QM 2 AVKAVSKAI 533 0.990 ANNs+QM 3 VSKAIRRTR 537 0.980 ANNs+QM 4 ALVLTDAAK 757 0.960 ALLELE: HLA-A24 Threshold for 4 % with score: 7.670 Prediction method Rank Sequence Residue No. Peptide Score QM 1 DRYINDRFL 396 12.510 QM 2 PRAKKVLEL 91 10.510 QM 3 KSKDMALVL 752 10.200 QM 4 DRARRVVVL 16 8.770 ALLELE: HLA-A*2402 Threshold for 4 % with score: 4 Prediction method Rank Sequence Residue No. Peptide Score ANNs+QM 1 IYNSLLQVL 643 0.970 ANNs+QM 2 PFTPRAKKV 88 0.840 ANNs+QM 3 LKDKQLYTL 251 0.660 ANNs+QM 4 DRYINDRFL 396 0.590 ALLELE: HLA-A3 Threshold for 4 % with score: 4 Prediction method Rank Sequence Residue No. Peptide Score ANNs+QM 1 ALVLTDAAK 757 1.000 ANNs+QM 2 LTAAAMEGK 187 0.930 ANNs+QM 3 LIGEPGVGK 223 0.890 ANNs+QM 4 ITDAAMVAA 383 0.810 ALLELE: HLA-A*3101 Threshold for 4 % with score: -1.609 Prediction method Rank Sequence Residue No. Peptide Score QM 1 GVGKTELSK 565 -0.916 QM 2 ALVLTDAAK 757 -0.916 QM 3 LTAAAMEGK 187 -1.609 ALLELE: HLA-A31 Threshold for 4 % with score: 4 Prediction method Rank Sequence Residue No. Peptide Score ANNs+QM 1 VSKAIRRTR 537 0.990 ANNs+QM 2 GVGKTELSK 565 0.920 ANNs+QM 3 DLAKAGAHS 840 0.900 ANNs+QM 4 FEKAASLRD 453 0.860 ALLELE: HLA-A*0301 Threshold for 4 % with score: 4 Prediction method Rank Sequence Residue No. Peptide Score ANNs+QM 1 ALVLTDAAK 757 0.990 ANNs+QM 2 GVGKTELSK 565 0.940 ANNs+QM 3 LIGEPGVGK 223 0.900 ANNs+QM 4 AKALLAKRG 764 0.830 ALLELE: HLA-A*3302 Threshold for 4 % with score: -0.105 Prediction method Rank Sequence Residue No. Peptide Score QM 1 VSKAIRRTR 537 2.708 QM 2 ESGSPSTSL 170 0.405 QM 3 DMALVLTDA 755 0.405 ALLELE: HLA-A68.1 Threshold for 4 % with score: 1.609 Prediction method Rank Sequence Residue No. Peptide Score QM 1 GVGKTELSK 565 5.886 QM 2 LTAAAMEGK 187 4.094 QM 3 VSKAIRRTR 537 2.708 QM 4 ALVLTDAAK 757 2.197 ALLELE: HLA-A20 Cattle Threshold for 4 % with score: 3.401 Prediction method Rank Sequence Residue No. Peptide Score QM 1 GKTAVVEGL 230 6.215 QM 2 LKDKQLYTL 251 6.215 QM 3 DKQLYTLDL 253 6.215 QM 4 GKTELSKAL 567 6.215 ALLELE: HLA-A2.1 Threshold for 4 % with score: 4 Prediction method Rank Sequence Residue No. Peptide Score ANNs+QM 1 GLIHEGEGV 45 1.000 ANNs+QM 2 GLIREGEGV 120 1.000 ANNs+QM 3 FLPDKAIDL 403 1.000 ANNs+QM 4 HTIEILKGL 363 0.990 ALLELE: HLA-B14 Threshold for 4 % with score: 4 Prediction method Rank Sequence Residue No. Peptide Score ANNs+QM 1 DRARRVVVL 16 1.000 ANNs+QM 2 PRAKKVLEL 91 1.000 ANNs+QM 3 DRYINDRFL 396 1.000 ANNs+QM 4 QDFEKAASL 451 1.000 ALLELE: HLA-B*2702 Threshold for 4 % with score: 0.000 Prediction method Rank Sequence Residue No. Peptide Score QM 1 RRKPFSVVL 624 5.193 QM 2 DRYINDRFL 396 3.296 QM 3 IREGEGVAA 122 2.996 QM 4 DRARRVVVL 16 2.890 ALLELE: HLA-B27 Threshold for 4 % with score: 4 Prediction method Rank Sequence Residue No. Peptide Score ANNs+QM 1 PRAKKVLEL 91 1.000 ANNs+QM 2 DRYINDRFL 396 1.000 ANNs+QM 3 RRKPFSVVL 624 1.000 ANNs+QM 4 DRARRVVVL 16 0.980 ALLELE: HLA-B*2705 Threshold for 4 % with score: 4 Prediction method Rank Sequence Residue No. Peptide Score ANNs+QM 1 RRKPFSVVL 624 1.000 ANNs+QM 2 PRAKKVLEL 91 0.990 ANNs+QM 3 DRARRVVVL 16 0.970 ANNs+QM 4 DRYINDRFL 396 0.960 ALLELE: HLA-B*3501 Threshold for 4 % with score: 4 Prediction method Rank Sequence Residue No. Peptide Score ANNs+QM 1 SRVAGQLKS 745 0.680 ANNs+QM 2 DRARRVVVL 16 0.660 ANNs+QM 3 KPFSVVLFD 626 0.580 ANNs+QM 4 EGVAAQVLV 126 0.490 ALLELE: HLA-B*3701 Threshold for 4 % with score: 0.405 Prediction method Rank Sequence Residue No. Peptide Score QM 1 QDFEKAASL 451 3.689 QM 2 SDISKPVGL 680 3.689 QM 3 TDAAKALLA 761 2.996 QM 4 GEPTVEHTI 357 2.708 ALLELE: HLA-B*3801 Threshold for 4 % with score: 0.445 Prediction method Rank Sequence Residue No. Peptide Score QM 1 VHGEVPETL 243 4.357 QM 2 IHEGEGVAA 47 2.890 QM 3 LHTLVGAGA 298 1.361 QM 4 HTIEILKGL 363 0.956 ALLELE: HLA-B*3901 Threshold for 4 % with score: 1.792 Prediction method Rank Sequence Residue No. Peptide Score QM 1 VHGEVPETL 243 5.193 QM 2 DRARRVVVL 16 3.114 QM 3 HTIEILKGL 363 2.890 QM 4 DRYINDRFL 396 2.708 ALLELE: HLA-B*3902 Threshold for 4 % with score: 0.693 Prediction method Rank Sequence Residue No. Peptide Score QM 1 GKTAVVEGL 230 3.178 QM 2 DKQLYTLDL 253 3.178 QM 3 GKTELSKAL 567 3.178 QM 4 LKDKQLYTL 251 2.996 ALLELE: HLA-B40 Threshold for 4 % with score: 0.000 Prediction method Rank Sequence Residue No. Peptide Score QM 1 GEGVAAKSL 50 3.689 QM 2 GEGVAAQVL 125 3.689 QM 3 QDFEKAASL 451 2.303 QM 4 SDISKPVGL 680 2.303 ALLELE: HLA-B*4403 Threshold for 4 % with score: 0.405 Prediction method Rank Sequence Residue No. Peptide Score QM 1 GEGVAAKSL 50 2.603 QM 2 GEGVAAQVL 125 2.197 QM 3 SDISKPVGL 680 2.015 QM 4 GEPTVEHTI 357 1.792 ALLELE: HLA-B*5101 Threshold for 4 % with score: 4 Prediction method Rank Sequence Residue No. Peptide Score ANNs+QM 1 VAEVDDEQI 485 1.000 ANNs+QM 2 DRYINDRFL 396 0.930 ANNs+QM 3 KPFSVVLFD 626 0.920 ANNs+QM 4 AASILKPKL 313 0.810 ALLELE: HLA-B*5102 Threshold for 4 % with score: 9.050 Prediction method Rank Sequence Residue No. Peptide Score QM 1 VAEVDDEQI 485 15.050 QM 2 EGVAAQVLV 126 13.430 QM 3 AGQLKSKDM 748 7.920 QM 4 TAVVEGLAQ 232 6.510 ALLELE: HLA-B*5103 Threshold for 4 % with score: 9.280 Prediction method Rank Sequence Residue No. Peptide Score QM 1 VAEVDDEQI 485 15.050 QM 2 EGVAAQVLV 126 13.430 QM 3 AGQLKSKDM 748 7.920 QM 4 TAVVEGLAQ 232 6.510 ALLELE: HLA-B*5201 Threshold for 4 % with score: 1.974 Prediction method Rank Sequence Residue No. Peptide Score QM 1 EGVAAQVLV 126 2.197 QM 2 VSITDAAMV 381 2.197 QM 3 IYNSLLQVL 643 1.982 QM 4 GEPTVEHTI 357 1.386 ALLELE: HLA-B*5301 Threshold for 4 % with score: 4 Prediction method Rank Sequence Residue No. Peptide Score ANNs+QM 1 KPFSVVLFD 626 0.940 ANNs+QM 2 KSKDMALVL 752 0.670 ANNs+QM 3 DRYINDRFL 396 0.530 ANNs+QM 4 AASILKPKL 313 0.420 ALLELE: HLA-B*5401 Threshold for 4 % with score: 4 Prediction method Rank Sequence Residue No. Peptide Score ANNs+QM 1 KPFSVVLFD 626 0.930 ANNs+QM 2 ITDAAMVAA 383 0.610 ANNs+QM 3 FLPDKAIDL 403 0.610 ANNs+QM 4 DRARRVVVL 16 0.520 ALLELE: HLA-B*51 Threshold for 4 % with score: 4 Prediction method Rank Sequence Residue No. Peptide Score ANNs+QM 1 KPFSVVLFD 626 0.940 ANNs+QM 2 DRYINDRFL 396 0.930 ANNs+QM 3 VSITDAAMV 381 0.870 ANNs+QM 4 LKDKQLYTL 251 0.840 ALLELE: HLA-B*5801 Threshold for 4 % with score: -0.223 Prediction method Rank Sequence Residue No. Peptide Score QM 1 KSKDMALVL 752 2.293 QM 2 HTIEILKGL 363 1.974 QM 3 ITDAAMVAA 383 1.194 QM 4 LSGYQGKEA 151 0.693 ALLELE: HLA-B60 Threshold for 4 % with score: 1.386 Prediction method Rank Sequence Residue No. Peptide Score QM 1 GEGVAAKSL 50 5.075 QM 2 GEGVAAQVL 125 5.075 QM 3 SDISKPVGL 680 4.382 QM 4 QDFEKAASL 451 2.996 ALLELE: HLA-B61 Threshold for 4 % with score: 0.000 Prediction method Rank Sequence Residue No. Peptide Score QM 1 GEGVAAKSL 50 2.175 QM 2 GEGVAAQVL 125 2.175 QM 3 GEPTVEHTI 357 2.175 QM 4 TDAAKALLA 761 1.609 ALLELE: HLA-B62 Threshold for 4 % with score: 0.693 Prediction method Rank Sequence Residue No. Peptide Score QM 1 FLPDKAIDL 403 0.971 QM 2 VLTDAAKAL 759 0.788 QM 3 GLIHEGEGV 45 0.693 QM 4 GLIREGEGV 120 0.693 ALLELE: HLA-B7 Threshold for 4 % with score: 4 Prediction method Rank Sequence Residue No. Peptide Score ANNs+QM 1 AAMVAAATL 386 1.000 ANNs+QM 2 HTIEILKGL 363 0.940 ANNs+QM 3 DRYINDRFL 396 0.840 ANNs+QM 4 LKDKQLYTL 251 0.800 ALLELE: HLA-B*0702 Threshold for 4 % with score: 4 Prediction method Rank Sequence Residue No. Peptide Score ANNs+QM 1 KPFSVVLFD 626 0.970 ANNs+QM 2 VSITDAAMV 381 0.690 ANNs+QM 3 DRYINDRFL 396 0.630 ANNs+QM 4 TDAAKALLA 761 0.600 ALLELE: HLA-B8 Threshold for 4 % with score: 4 Prediction method Rank Sequence Residue No. Peptide Score ANNs+QM 1 EDAVKAVSK 531 1.000 ANNs+QM 2 VSITDAAMV 381 0.740 ANNs+QM 3 TDAAKALLA 761 0.740 ANNs+QM 4 KSKDMALVL 752 0.690 ALLELE: HLA-Cw*0301 Threshold for 4 % with score: 2.015 Prediction method Rank Sequence Residue No. Peptide Score QM 1 AAMVAAATL 386 3.871 QM 2 HTIEILKGL 363 3.584 QM 3 DRYINDRFL 396 3.178 QM 4 SDISKPVGL 680 2.996 ALLELE: HLA-Cw*0401 Threshold for 4 % with score: 4.370 Prediction method Rank Sequence Residue No. Peptide Score QM 1 VLTDAAKAL 759 10.160 QM 2 FLPDKAIDL 403 6.160 QM 3 HTIEILKGL 363 4.490 QM 4 IYNSLLQVL 643 4.490 ALLELE: HLA-Cw*0602 Threshold for 4 % with score: 1.482 Prediction method Rank Sequence Residue No. Peptide Score QM 1 IYNSLLQVL 643 2.676 QM 2 HTIEILKGL 363 2.580 QM 3 AASILKPKL 313 1.887 QM 4 GKTELSKAL 567 1.887 ALLELE: HLA-Cw*0702 Threshold for 4 % with score: 1.212 Prediction method Rank Sequence Residue No. Peptide Score QM 1 IYNSLLQVL 643 1.974 QM 2 RRKPFSVVL 624 1.212 QM 3 GKTAVVEGL 230 0.875 QM 4 VHGEVPETL 243 0.875 ALLELE: H2-Db Threshold for 4 % with score: 4 Prediction method Rank Sequence Residue No. Peptide Score ANNs+QM 1 AAMVAAATL 386 0.980 ANNs+QM 2 RKPPAEPDL 833 0.980 ANNs+QM 3 REGEGVAAQ 123 0.910 ANNs+QM 4 GEGVAAQVL 125 0.820 ALLELE: H2-Dd Threshold for 4 % with score: 11.800 Prediction method Rank Sequence Residue No. Peptide Score QM 1 GEPTVEHTI 357 20.510 QM 2 RKPPAEPDL 833 17.420 QM 3 GEGVAAKSL 50 16.770 QM 4 FLPDKAIDL 403 14.710 ALLELE: H2-Kb Threshold for 4 % with score: 4 Prediction method Rank Sequence Residue No. Peptide Score ANNs+QM 1 AAMVAAATL 386 0.990 ANNs+QM 2 DRYINDRFL 396 0.980 ANNs+QM 3 AASILKPKL 313 0.960 ANNs+QM 4 RKPPAEPDL 833 0.960 ALLELE: H2-Kd Threshold for 4 % with score: 4 Prediction method Rank Sequence Residue No. Peptide Score ANNs+QM 1 SDISKPVGL 680 1.000 ANNs+QM 2 PSGVGKTEL 563 0.990 ANNs+QM 3 IYNSLLQVL 643 0.990 ANNs+QM 4 AASILKPKL 313 0.980 ALLELE: H2-Kk Threshold for 4 % with score: 1.609 Prediction method Rank Sequence Residue No. Peptide Score QM 1 GEPTVEHTI 357 7.601 QM 2 GEGVAAKSL 50 2.996 QM 3 GEGVAAQVL 125 2.996 QM 4 AVKAVSKAI 533 2.303 ALLELE: H2-Ld Threshold for 4 % with score: 4 Prediction method Rank Sequence Residue No. Peptide Score ANNs+QM 1 KSKDMALVL 752 1.000 ANNs+QM 2 DRARRVVVL 16 0.950 ANNs+QM 3 PETLKDKQL 248 0.900 ANNs+QM 4 PRAKKVLEL 91 0.890 ALLELE: HLA-G Threshold for 4 % with score: 9.260 Prediction method Rank Sequence Residue No. Peptide Score QM 1 FLPDKAIDL 403 21.570 QM 2 DRARRVVVL 16 15.310 QM 3 RKPPAEPDL 833 15.040 QM 4 PRAKKVLEL 91 13.780 ALLELE: H-2Qa Threshold for 4 % with score: 6.000 Prediction method Rank Sequence Residue No. Peptide Score QM 1 GEPTVEHTI 357 10.120 QM 2 HTIEILKGL 363 8.100 QM 3 SDISKPVGL 680 8.070 QM 4 DMALVLTDA 755 6.950 ALLELE: HLA-B*2706 Threshold for 4 % with score: 5.000 Prediction method Rank Sequence Residue No. Peptide Score QM 1 IREGEGVAA 122 11.870 QM 2 IHEGEGVAA 47 9.870 QM 3 PETLKDKQL 248 9.870 QM 4 LSGYQGKEA 151 7.330 ALLELE: HLA-B35 Threshold for 4 % with score: 8.350 Prediction method Rank Sequence Residue No. Peptide Score QM 1 QDFEKAASL 451 8.830 QM 2 VAEVDDEQI 485 7.810 QM 3 ESGSPSTSL 170 7.130 QM 4 AASILKPKL 313 7.070 ALLELE: Mamu-A*01 Threshold for 4 % with score: 3.650 Prediction method Rank Sequence Residue No. Peptide Score QM 1 VAEVDDEQI 485 2.890 QM 2 ESGSPSTSL 170 2.050 QM 3 FLPDKAIDL 403 0.910 QM 4 DRYINDRFL 396 0.490 ALLELE: HLA-A*0204 Threshold for 4 % with score: 12.070 Prediction method Rank Sequence Residue No. Peptide Score QM 1 VLTDAAKAL 759 21.890 QM 2 LKDKQLYTL 251 18.860 QM 3 DLDVVAEVD 481 18.790 QM 4 AAMVAAATL 386 16.630 ALLELE: HLA-B*2703 Threshold for 4 % with score: 5.130 Prediction method Rank Sequence Residue No. Peptide Score QM 1 PRAKKVLEL 91 10.480 QM 2 RRKPFSVVL 624 8.770 QM 3 VHGEVPETL 243 5.970 QM 4 IREGEGVAA 122 5.780 ALLELE: HLA-B*2704 Threshold for 4 % with score: 8.790 Prediction method Rank Sequence Residue No. Peptide Score QM 1 RRKPFSVVL 624 12.310 QM 2 DRYINDRFL 396 11.810 QM 3 GEGVAAKSL 50 10.800 QM 4 GKTELSKAL 567 10.550 ALLELE: HLA-B*2902 Threshold for 4 % with score: 7.750 Prediction method Rank Sequence Residue No. Peptide Score QM 1 REGEGVAAQ 123 15.880 QM 2 HEGEGVAAK 48 13.930 QM 3 GEPTVEHTI 357 11.160 QM 4 GEGVAAKSL 50 10.740 ALLELE: HLA-A*3301 Threshold for 4 % with score: 3.840 Prediction method Rank Sequence Residue No. Peptide Score QM 1 LIGEPGVGK 223 4.920 QM 2 VSKAIRRTR 537 3.250 QM 3 AVKAVSKAI 533 1.850 QM 4 AASILKPKL 313 1.780 ALLELE: HLA-B44 Threshold for 4 % with score: 4.900 Prediction method Rank Sequence Residue No. Peptide Score QM 1 GEGVAAQVL 125 11.210 QM 2 GEGVAAKSL 50 9.090 QM 3 HEGEGVAAK 48 8.940 QM 4 REGEGVAAQ 123 5.850 ALLELE: HLA-A*6801 Threshold for 4 % with score: 4 Prediction method Rank Sequence Residue No. Peptide Score ANNs+QM 1 AVKAVSKAI 533 1.000 ANNs+QM 2 LTAAAMEGK 187 0.930 ANNs+QM 3 ALVLTDAAK 757 0.930 ANNs+QM 4 GVGKTELSK 565 0.800 ALLELE: HLA-A*6802 Threshold for 4 % with score: 4 Prediction method Rank Sequence Residue No. Peptide Score ANNs+QM 1 GLIHEGEGV 45 1.000 ANNs+QM 2 HTIEILKGL 363 1.000 ANNs+QM 3 VSITDAAMV 381 1.000 ANNs+QM 4 GLIREGEGV 120 0.990